STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115369177thrombospondin-4-B. (926 aa)    
Predicted Functional Partners:
ENSMMDP00005035938
Integrin, beta 4.
   
 0.799
itgb5
Integrin subunit beta 5.
    
 0.794
ENSMMDP00005018896
Integrin, beta 6.
    
  0.793
LOC115375120
Integrin beta-1-like.
    
  0.793
itgb1
Integrin subunit beta 1.
    
  0.793
ENSMMDP00005022443
Integrin, beta 8.
    
 0.790
cd36
CD36 molecule.
    
 0.783
LOC115359481
Syndecan-4-like.
    
  0.779
ENSMMDP00005005853
Integrin alpha 4.
    
  0.778
ENSMMDP00005012429
Integrin, alpha 9.
    
  0.778
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.