STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atrnAttractin. (1386 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor.
     
 0.764
PAFAH1B1
Lissencephaly-1 homolog A.
    
 0.681
tbc1d31
TBC1 domain family member 31.
    
 0.681
LOC115370974
Lissencephaly-1 homolog B.
    
 0.681
mgrn1
Mahogunin ring finger 1.
   
 
 0.663
pla2g7
Phospholipase A2 group VII.
     
 0.645
ENSMMDP00005025932
Adaptor related protein complex 3 subunit delta 1.
    
 0.613
ENSMMDP00005044310
Adaptor related protein complex 2 subunit alpha 1.
    
  0.595
rnf157
Ring finger protein 157.
   
 
 0.537
ENSMMDP00005039384
Adaptor related protein complex 2 subunit mu 1a.
    
  0.535
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.