STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (611 aa)    
Predicted Functional Partners:
ENSMMDP00005042991
Nebulin-related anchoring protein.
   
 0.639
cops3
COP9 signalosome subunit 3.
    
  0.611
ENSMMDP00005041039
Myosin, light chain 13.
   
 
 0.609
ENSMMDP00005053061
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.609
ENSMMDP00005044593
annotation not available
   
 0.586
ENSMMDP00005044615
annotation not available
   
 0.586
GPS1
COP9 signalosome complex subunit 1-like.
    
  0.581
LOC115364363
COP9 signalosome complex subunit 1.
    
  0.581
ENSMMDP00005001989
Myosin binding protein Hb.
   
 0.556
LOC115368494
Endoplasmic reticulum chaperone BiP-like.
    
  0.549
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.