STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpna3Karyopherin subunit alpha 3. (551 aa)    
Predicted Functional Partners:
kpnb1
Karyopherin subunit beta 1.
   
 0.974
cse1l
Chromosome segregation 1 like.
   
 0.971
ENSMMDP00005040384
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
  0.927
REL
REL proto-oncogene, NF-kB subunit.
    
  0.923
LOC115376764
Transcription factor p65-like.
    
  0.923
rcc1
Regulator of chromosome condensation 1.
   
 
 0.911
xpo5
Exportin 5.
   
 0.905
ran
RAN, member RAS oncogene family.
   
 0.900
ENSMMDP00005046789
Adhesion G protein-coupled receptor D1.
   
 0.900
ENSMMDP00005032282
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
    
  0.892
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.