STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005038188annotation not available (373 aa)    
Predicted Functional Partners:
nup133
Nucleoporin 133.
   
 0.841
ENSMMDP00005015191
Nucleoporin 107.
   
 0.835
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.831
nup85
Nucleoporin 85.
    
 0.815
seh1l
SEH1 like nucleoporin.
    
 0.813
ncoa5
Nuclear receptor coactivator 5.
    
 0.725
ENSMMDP00005018322
Si:ch211-216l23.2.
    
 0.725
nup98
Nucleoporin 98.
    
 0.725
ENSMMDP00005039163
annotation not available
    
 0.725
acmsd
Aminocarboxymuconate semialdehyde decarboxylase.
  
 
  0.693
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.