STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd16aAbhydrolase domain containing 16A. (543 aa)    
Predicted Functional Partners:
hm13
Histocompatibility minor 13.
   
 
 0.536
pisd
Phosphatidylserine decarboxylase.
      
 0.528
RNF5
Ring finger protein 5.
    
 
 0.513
atp5mc3
ATP synthase membrane subunit c locus 3.
    
 
 0.511
ENSMMDP00005021435
Abhydrolase domain containing 6b.
      
 0.452
ENSMMDP00005032661
Abhydrolase domain containing 12.
      
 0.452
LOC115356414
Prolyl endopeptidase-like.
      
 0.452
ENSMMDP00005003069
Abhydrolase domain containing 11.
      
 0.451
ift81
Intraflagellar transport 81.
      
 0.443
rnf185
Ring finger protein 185.
    
 
 0.424
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.