STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115366221Ubiquitin-conjugating enzyme E2 D2. (147 aa)    
Predicted Functional Partners:
ENSMMDP00005011945
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.998
trip12
Thyroid hormone receptor interactor 12.
   
 0.964
ENSMMDP00005044403
Ubiquitin B.
   
 0.932
anapc11
Anaphase promoting complex subunit 11.
    
 0.918
rps27a
Ribosomal protein S27a.
   
 0.911
ENSMMDP00005050350
annotation not available
    
 0.906
ENSMMDP00005054542
Baculoviral IAP repeat containing 6.
   
0.905
rbx1
Ring-box 1.
   
 0.902
stub1
STIP1 homology and U-box containing protein 1.
   
 0.894
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.887
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.