STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkbh3alkB homolog 3, alpha-ketoglutaratedependent dioxygenase. (295 aa)    
Predicted Functional Partners:
ephx2
Epoxide hydrolase 2.
  
 
 0.816
ENSMMDP00005013872
Glucan (1,4-alpha-), branching enzyme 1a.
  
 
 0.809
LOC115370258
1,4-alpha-glucan-branching enzyme-like.
  
 
 0.809
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.808
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.803
otc
Ornithine carbamoyltransferase.
  
 
 0.788
ENSMMDP00005006036
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.777
gale
UDP-galactose-4-epimerase.
  
 
 0.776
ENSMMDP00005008216
Trehalase (brush-border membrane glycoprotein).
  
 
 0.748
ENSMMDP00005000002
annotation not available
  
 
 0.741
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.