STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005041070Early endosome antigen 1. (1374 aa)    
Predicted Functional Partners:
rab5c
RAB5C, member RAS oncogene family.
    
 0.955
LOC115377997
Ras-related protein Rab-5C.
    
 0.955
LOC115379651
Ras-related protein Rab-5B-like.
    
 0.955
LOC115367669
Ras-related protein Rab-5A.
    
 0.954
LOC115373507
Ras-related protein Rab-5A.
    
 0.954
RAB17
Ras-related protein Rab-17-like.
    
 0.912
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.906
LOC115370098
Rab5 GDP/GTP exchange factor-like.
    
 0.759
ENSMMDP00005034698
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.759
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 
 0.713
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.