STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005041490Si:ch73-182a11.2. (936 aa)    
Predicted Functional Partners:
rbm8a
RNA binding motif protein 8A.
    
 0.974
gart
annotation not available
   
 0.968
LOC115357484
Protein mago nashi homolog.
    
 0.924
eif1ax
Eukaryotic translation initiation factor 1A X-linked.
    
 
 0.892
ran
RAN, member RAS oncogene family.
    
 0.883
ENSMMDP00005046789
Adhesion G protein-coupled receptor D1.
    
 0.883
LOC115364013
SUMO-conjugating enzyme UBC9-like.
   
 
 0.878
ube2i
Ubiquitin conjugating enzyme E2 I.
   
 
 0.878
ENSMMDP00005048110
Potassium channel tetramerization domain containing 2.
   
 
 0.863
LOC115354147
Eukaryotic translation initiation factor 5A-1-like.
    
 
 0.680
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.