STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005042032CCAAT enhancer binding protein alpha. (299 aa)    
Predicted Functional Partners:
LOC115362753
CCAAT/enhancer-binding protein beta-like.
   
0.930
ddit3
DNA damage inducible transcript 3.
    
 0.882
ENSMMDP00005026081
RUNX family transcription factor 1.
    
 0.847
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.808
LOC115357184
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.808
ENSMMDP00005036332
RUNX family transcription factor 2b.
    
 0.802
ENSMMDP00005045423
RUNX family transcription factor 3.
    
 0.802
ENSMMDP00005007392
RUNX1 partner transcriptional co-repressor 1.
    
 0.796
ENSMMDP00005008852
CBFA2/RUNX1 partner transcriptional co-repressor 3.
    
 0.796
cdk4
Cyclin dependent kinase 4.
    
 0.787
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.