STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005042072Zinc finger protein 395a. (412 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.887
bard1
BRCA1 associated RING domain 1.
    
 0.843
ENSMMDP00005011945
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.839
LOC115358931
Heme-binding protein 1-like.
    
 0.818
lyrm4
LYR motif containing 4.
    
 0.818
ENSMMDP00005000765
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
 0.812
rag2
Recombination activating 2.
   
 0.808
rpl21
Ribosomal protein L21.
   
   0.775
babam1
BRISC and BRCA1 A complex member 1.
    
 0.745
ENSMMDP00005025480
PVR cell adhesion molecule related 2 like.
   
  0.725
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.