STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115357042Cryptochrome-1-like. (519 aa)    
Predicted Functional Partners:
ENSMMDP00005036153
Period circadian clock 1b.
   
 0.874
ENSMMDP00005049492
Timeless circadian clock.
    
 0.869
arntl
Aryl hydrocarbon receptor nuclear translocator like.
   
 0.846
LOC115360192
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
   
 0.831
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.831
LOC115358982
Period circadian protein homolog 3-like.
   
 0.825
ENSMMDP00005015904
annotation not available
   
 0.825
LOC115375164
Period circadian protein homolog 2-like.
   
 0.825
ENSMMDP00005017047
Neuronal PAS domain protein 2.
    
 0.818
ENSMMDP00005010530
Clock circadian regulator b.
    
 0.800
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.