STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005044907Musashi RNA-binding protein 1. (302 aa)    
Predicted Functional Partners:
ENSMMDP00005041736
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
  
 
 0.907
dazap1
DAZ associated protein 1.
  
  
 
0.768
cstf3
Cleavage stimulation factor subunit 3.
   
 0.767
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.731
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.722
ENSMMDP00005045623
annotation not available
  
 
0.681
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1.
  
 
0.676
rbmx
RNA binding motif protein X-linked.
  
 
0.675
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
  
 
0.673
ENSMMDP00005045629
annotation not available
  
 
0.672
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.