STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sall1Spalt like transcription factor 1. (1307 aa)    
Predicted Functional Partners:
LOC115369411
POU domain, class 5, transcription factor 1-like.
   
 0.793
LOC115377594
Histone-binding protein RBBP7.
    
  0.715
LOC115368241
Histone-binding protein RBBP4-like.
    
  0.715
RBBP4
Histone-binding protein RBBP4.
    
  0.715
LOC115357692
Transcriptional repressor p66-alpha-like.
    
 0.650
LOC115375078
Transcriptional repressor p66 alpha-like.
    
 0.650
ENSMMDP00005014161
GATA zinc finger domain containing 2B.
    
 0.650
ENSMMDP00005034365
Brain-specific homeobox.
   
 0.631
mta2
Metastasis associated 1 family member 2.
    
  0.620
mta1
Metastasis associated 1.
    
  0.620
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.