STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPTFBromodomain PHD finger transcription factor. (2646 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.987
c18h17orf49
Chromosome 18 C17orf49 homolog.
    
 0.964
ENSMMDP00005011718
annotation not available
  
  
 
0.925
ENSMMDP00005043299
annotation not available
     
0.924
ENSMMDP00005000014
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.917
chd1l
Chromodomain helicase DNA binding protein 1 like.
   
 0.913
hells
Helicase, lymphoid specific.
   
 0.913
LOC115377594
Histone-binding protein RBBP7.
    
 0.892
LOC115368241
Histone-binding protein RBBP4-like.
    
 0.892
RBBP4
Histone-binding protein RBBP4.
    
 0.892
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.