STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005046310Calcium release activated channel regulator 2Ab. (628 aa)    
Predicted Functional Partners:
c9orf72
C9orf72-SMCR8 complex subunit.
    
  0.865
ENSMMDP00005006218
Dynein, cytoplasmic 1, light intermediate chain 2.
    
  0.836
ENSMMDP00005011573
Dynein, cytoplasmic 1, light intermediate chain 1.
    
  0.836
ENSMMDP00005018846
CHM Rab escort protein.
    
 0.780
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.759
ENSMMDP00005016043
annotation not available
    
 0.738
sqstm1
Sequestosome 1.
    
 0.738
ENSMMDP00005014773
RAB3A interacting protein (rabin3).
    
 0.721
ENSMMDP00005046396
RAB3A interacting protein (rabin3)-like 1.
    
 0.721
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.684
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.