STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
twnkTwinkle mtDNA helicase. (725 aa)    
Predicted Functional Partners:
ENSMMDP00005053716
Polymerase (DNA directed), gamma.
   
 
 0.896
ENSMMDP00005024493
Polymerase (DNA directed), theta.
   
 
 0.870
ENSMMDP00005033370
Polymerase (DNA directed) nu.
   
 
 0.870
ENSMMDP00005050691
Helicase, POLQ like.
   
 
 0.870
polrmt
RNA polymerase mitochondrial.
   
  
 0.612
ssbp1
Single stranded DNA binding protein 1.
   
  
 0.595
tfam
Transcription factor A, mitochondrial.
      
 0.572
polg2
DNA polymerase gamma 2, accessory subunit.
      
 0.570
gabpa
GA binding protein transcription factor subunit alpha.
     
 0.560
cpox
Coproporphyrinogen oxidase.
    
   0.552
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.