STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005047973T-box transcription factor 1. (460 aa)    
Predicted Functional Partners:
ENSMMDP00005026909
annotation not available
   
  
 0.707
ENSMMDP00005052230
annotation not available
   
    0.695
nkx2-5
NK2 homeobox 5.
    
 
 0.544
ENSMMDP00005000156
H6 family homeobox 4.
    
 
 0.505
LOC115372606
Homeobox protein HMX3-A.
    
 
 0.505
hmx3
H6 family homeobox 3.
    
 
 0.505
ENSMMDP00005016191
Prickle homolog 1b.
      
 0.457
prickle2
Prickle planar cell polarity protein 2.
      
 0.456
LOC115362728
Prickle-like protein 2.
      
 0.456
PRICKLE1
Prickle-like protein 1.
      
 0.452
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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