LOC115374594 protein (Myripristis murdjan) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC115374594

Dual specificity protein phosphatase 22-B-like. (191 aa)

Predicted Functional Partners:

ENSMMDP00005056096

0.796

LOC115372106

0.657

ENSMMDP00005055234

0.657

ENSMMDP00005023274

0.653

ENSMMDP00005045135

0.653

espl1

0.621

ENSMMDP00005002965

0.616

ENSMMDP00005003006

0.616

ENSMMDP00005029417

0.616

ENSMMDP00005029421

0.616

Your Current Organism:

Myripristis murdjan

NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMMDP00005002965	ENSMMDP00005003006	ENSMMDP00005002965	ENSMMDP00005003006	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.985
ENSMMDP00005002965	ENSMMDP00005029417	ENSMMDP00005002965	ENSMMDP00005029417	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	annotation not available	0.861
ENSMMDP00005002965	ENSMMDP00005029421	ENSMMDP00005002965	ENSMMDP00005029421	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	annotation not available	0.862
ENSMMDP00005002965	LOC115374594	ENSMMDP00005002965	ENSMMDP00005048040	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	Dual specificity protein phosphatase 22-B-like.	0.616
ENSMMDP00005003006	ENSMMDP00005002965	ENSMMDP00005003006	ENSMMDP00005002965	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.985
ENSMMDP00005003006	ENSMMDP00005029417	ENSMMDP00005003006	ENSMMDP00005029417	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	annotation not available	0.861
ENSMMDP00005003006	ENSMMDP00005029421	ENSMMDP00005003006	ENSMMDP00005029421	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	annotation not available	0.985
ENSMMDP00005003006	LOC115374594	ENSMMDP00005003006	ENSMMDP00005048040	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	Dual specificity protein phosphatase 22-B-like.	0.616
ENSMMDP00005023274	ENSMMDP00005045135	ENSMMDP00005023274	ENSMMDP00005045135	Inositol polyphosphate phosphatase-like 1b.	Inositol polyphosphate phosphatase-like 1a.	0.845
ENSMMDP00005023274	LOC115374594	ENSMMDP00005023274	ENSMMDP00005048040	Inositol polyphosphate phosphatase-like 1b.	Dual specificity protein phosphatase 22-B-like.	0.653
ENSMMDP00005029417	ENSMMDP00005002965	ENSMMDP00005029417	ENSMMDP00005002965	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.861
ENSMMDP00005029417	ENSMMDP00005003006	ENSMMDP00005029417	ENSMMDP00005003006	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.861
ENSMMDP00005029417	ENSMMDP00005029421	ENSMMDP00005029417	ENSMMDP00005029421	annotation not available	annotation not available	0.861
ENSMMDP00005029417	LOC115374594	ENSMMDP00005029417	ENSMMDP00005048040	annotation not available	Dual specificity protein phosphatase 22-B-like.	0.616
ENSMMDP00005029421	ENSMMDP00005002965	ENSMMDP00005029421	ENSMMDP00005002965	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.862
ENSMMDP00005029421	ENSMMDP00005003006	ENSMMDP00005029421	ENSMMDP00005003006	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 3b.	0.985
ENSMMDP00005029421	ENSMMDP00005029417	ENSMMDP00005029421	ENSMMDP00005029417	annotation not available	annotation not available	0.861
ENSMMDP00005029421	LOC115374594	ENSMMDP00005029421	ENSMMDP00005048040	annotation not available	Dual specificity protein phosphatase 22-B-like.	0.616
ENSMMDP00005045135	ENSMMDP00005023274	ENSMMDP00005045135	ENSMMDP00005023274	Inositol polyphosphate phosphatase-like 1a.	Inositol polyphosphate phosphatase-like 1b.	0.845
ENSMMDP00005045135	LOC115374594	ENSMMDP00005045135	ENSMMDP00005048040	Inositol polyphosphate phosphatase-like 1a.	Dual specificity protein phosphatase 22-B-like.	0.653