STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1AProtein fem-1 homolog A. (617 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
  0.983
cul2
Cullin 2.
    
 0.966
rbx1
Ring-box 1.
    
 0.914
appbp2
Amyloid beta precursor protein binding protein 2.
  
 0.893
ENSMMDP00005020939
Ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila).
   
  0.874
KLHDC2
Kelch domain containing 2.
    
 0.871
commd1
Copper metabolism domain containing 1.
    
  0.865
asb4
Ankyrin repeat and SOCS box containing 4.
    
  0.865
zer1
Zyg-11 related cell cycle regulator.
     
 0.857
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.857
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.