STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005048317Zgc:162872. (669 aa)    
Predicted Functional Partners:
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
0.767
ENSMMDP00005009694
Si:dkey-16l2.16.
    
 
 0.720
rab35
RAB35, member RAS oncogene family.
    
 
 0.720
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
0.702
ENSMMDP00005019452
HESX homeobox 1.
    
 
0.702
ENSMMDP00005003672
ADP-ribosylation factor GTPase activating protein 2.
    
0.682
arfgap3
ADP ribosylation factor GTPase activating protein 3.
    
0.682
ENSMMDP00005015392
ADP-ribosylation factor 6b.
    
 0.670
ENSMMDP00005042466
ADP-ribosylation factor 6a.
    
 0.670
ENSMMDP00005038552
ADP-ribosylation factor-like 15a.
    
 0.633
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.