STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005048675Spermatogenesis associated 18. (480 aa)    
Predicted Functional Partners:
ENSMMDP00005014090
annotation not available
   
  
 0.607
suox
Sulfite oxidase.
      
 0.584
ENSMMDP00005027681
Cilia and flagella associated protein 161.
   
  
 0.551
ENSMMDP00005016046
annotation not available
      
 0.531
ENSMMDP00005005733
Leucine rich repeat containing 23.
      
 0.524
SPATA16
Spermatogenesis associated 16.
      
 0.515
ENSMMDP00005037435
annotation not available
      
 0.510
cfap52
Cilia and flagella associated protein 52.
   
  
 0.483
ENSMMDP00005000282
annotation not available
      
 0.452
ENSMMDP00005045196
Leucine rich repeat containing 34.
      
 0.452
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.