STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005049169annotation not available (245 aa)    
Predicted Functional Partners:
ENSMMDP00005014746
annotation not available
 
      0.899
ENSMMDP00005049172
annotation not available
 
      0.899
LOC115374146
Uncharacterized LOC115374146.
    
  0.738
ENSMMDP00005052083
annotation not available
    
 0.568
lig1
DNA ligase 1.
    
 0.564
ENSMMDP00005015227
Collagen, type X, alpha 1a.
 
      0.562
ENSMMDP00005028324
Collagen, type I, alpha 2.
 
      0.562
ENSMMDP00005018896
Integrin, beta 6.
    
 0.547
ENSMMDP00005035938
Integrin, beta 4.
    
 0.547
LOC115359472
Complement C1q subcomponent subunit C-like.
    
  0.527
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.