STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005049306Matrix metallopeptidase 19. (448 aa)    
Predicted Functional Partners:
TIMP2
Metalloproteinase inhibitor 2-like.
    
 0.780
timp2
TIMP metallopeptidase inhibitor 2.
    
 0.780
TIMP3
Metalloproteinase inhibitor 3-like.
    
 0.768
LOC115370785
Matrix metalloproteinase-20-like.
  
 
0.604
ENSMMDP00005004161
Matrix metallopeptidase 13b.
  
 
0.601
LOC115371926
Collagenase 3-like.
  
 
0.599
ENSMMDP00005050482
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.586
ENSMMDP00005015333
Matrix metallopeptidase 30.
  
 
0.576
ENSMMDP00005054667
annotation not available
   
 0.575
ENSMMDP00005004297
Tenascin N.
    
  0.562
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.