STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005049851Actin binding LIM protein family, member 3. (666 aa)    
Predicted Functional Partners:
ENSMMDP00005030758
Actin binding LIM protein family, member 2.
  
  
 
0.835
LOC115358911
Cell division control protein 42 homolog.
     
 0.763
CDC42
Cell division control protein 42 homolog.
     
 0.763
DMTN
Dematin actin binding protein.
     
0.676
ENSMMDP00005047987
annotation not available
     
0.676
ENSMMDP00005054173
Actin binding LIM protein 1a.
     
0.676
LOC115368304
Cell division control protein 42 homolog.
     
 0.658
LOC115374276
Cell division control protein 42 homolog.
     
 0.658
ENSMMDP00005004169
annotation not available
     
 0.552
ENSMMDP00005004172
annotation not available
     
 0.552
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.