STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc13Tetratricopeptide repeat domain 13. (843 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.958
ENSMMDP00005033508
annotation not available
   
 0.857
ENSMMDP00005033512
annotation not available
   
 0.837
ENSMMDP00005052083
annotation not available
   
 0.804
ENSMMDP00005020902
Bardet-Biedl syndrome 9.
    
 0.787
nudt12
Nudix hydrolase 12.
   
  0.786
ENSMMDP00005018695
annotation not available
    
 0.780
ENSMMDP00005018700
BCL2 associated athanogene 3.
    
 0.780
cdc16
Cell division cycle 16.
    
 0.778
anapc4
Anaphase promoting complex subunit 4.
    
 0.777
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.