STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005051006annotation not available (1431 aa)    
Predicted Functional Partners:
cbx8
Chromobox 8.
    
 0.816
RING1
Ring finger protein 1.
    
 0.769
rnf2
Ring finger protein 2.
    
 0.769
ENSMMDP00005014152
Bmi1 polycomb ring finger oncogene 1a.
    
 0.762
pcgf2
Polycomb group ring finger 2.
    
 0.762
ENSMMDP00005034744
annotation not available
   
 0.757
ENSMMDP00005003459
Zgc:158376.
    
 0.750
kdm2a
Lysine demethylase 2A.
    
 0.750
LOC115360933
Lysine-specific demethylase 2A-like.
    
 0.750
ENSMMDP00005045577
Lysine (K)-specific demethylase 2Ba.
    
 0.750
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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