STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxa1Homeobox A1. (330 aa)    
Predicted Functional Partners:
ENSMMDP00005009381
Homeobox B1b.
  
0.858
ENSMMDP00005001040
Homeobox B1a.
  
0.846
LOC115362507
Homeobox protein Hox-A1-like.
   
0.839
LOC115373813
pre-B-cell leukemia transcription factor 1-like.
    
 0.751
ENSMMDP00005008717
annotation not available
    
 0.751
ENSMMDP00005018597
pre-B-cell leukemia transcription factor 4.
    
 0.751
LOC115358310
pre-B-cell leukemia transcription factor 1.
    
 0.751
LOC115375076
pre-B-cell leukemia transcription factor 1-like.
    
 0.751
LOC115373555
pre-B-cell leukemia transcription factor 1-like.
    
 0.751
ENSMMDP00005009389
Meis homeobox 1 b.
    
 0.458
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.