STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005051385PDZ domain containing 3a. (566 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57.
    
 0.732
ENSMMDP00005003006
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.728
ENSMMDP00005029417
annotation not available
    
 0.728
ENSMMDP00005029421
annotation not available
    
 0.728
ift172
Intraflagellar transport 172.
    
 0.721
traf3ip1
TRAF3 interacting protein 1.
    
 0.720
ENSMMDP00005002965
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.718
ENSMMDP00005045835
annotation not available
    
 0.718
ift80
Intraflagellar transport 80.
    
 0.717
ENSMMDP00005001041
Protein kinase C, zeta.
    
 0.700
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.