STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcl1RNA terminal phosphate cyclase like 1. (379 aa)    
Predicted Functional Partners:
ENSMMDP00005001655
N-acetyltransferase 10.
   
 0.999
utp18
UTP18 small subunit processome component.
   
 0.999
bysl
Bystin like.
   
 0.999
utp3
UTP3 small subunit processome component.
   
 0.999
nop58
NOP58 ribonucleoprotein.
  
 0.999
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.999
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.999
ENSMMDP00005010637
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.999
mphosph10
M-phase phosphoprotein 10.
   
 0.999
LOC115375079
Periodic tryptophan protein 2 homolog.
   
 0.999
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.