STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115356106Epithelial splicing regulatory protein 2-like. (741 aa)    
Predicted Functional Partners:
RBPMS
RNA-binding protein with multiple splicing-like.
    
 
 0.611
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
     
 0.518
polr2k
RNA polymerase II subunit K.
     
 0.450
qki
QKI, KH domain containing RNA binding.
    
 0.449
ENSMMDP00005010979
annotation not available
    
 0.449
LOC115354026
Protein quaking-A.
    
 0.449
ENSMMDP00005045581
annotation not available
    
 0.449
LOC115354093
RNA-binding protein with multiple splicing 2.
    
 
 0.428
wdr44
WD repeat domain 44.
      
 0.426
ENSMMDP00005029951
annotation not available
     
 0.418
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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