STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx3xDEAD-box helicase 3 X-linked. (726 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.965
eftud2
Elongation factor Tu GTP binding domain containing 2.
  
 0.912
prpf6
pre-mRNA processing factor 6.
   
 0.909
eif3g
Eukaryotic translation initiation factor 3 subunit G.
   
 0.894
tbk1
TANK binding kinase 1.
   
 0.893
atp5f1c
ATP synthase F1 subunit gamma.
  
 0.883
eif3b
Eukaryotic translation initiation factor 3 subunit B.
   
 0.877
cdc5l
Cell division cycle 5 like.
    
 0.865
eif3i
Eukaryotic translation initiation factor 3 subunit I.
   
 0.857
eif3a
Eukaryotic translation initiation factor 3 subunit A.
   
 0.855
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.