STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsnaxTranslin associated factor X. (280 aa)    
Predicted Functional Partners:
tsn
Translin.
  
0.999
dicer1
Dicer 1, ribonuclease III.
     
 0.954
drosha
Drosha ribonuclease III.
     
 0.935
ENSMMDP00005040742
Ribonuclease P/MRP 30 subunit.
  
 
  0.929
pop5
POP5 homolog, ribonuclease P/MRP subunit.
    
 0.924
ENSMMDP00005004843
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
  0.922
ENSMMDP00005039560
Protein only RNase P catalytic subunit.
   
 
  0.920
tarbp2
TARBP2 subunit of RISC loading complex.
     
 0.843
prkra
Protein activator of interferon induced protein kinase EIF2AK2.
     
 0.843
ENSMMDP00005035827
annotation not available
    
 0.782
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.