STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115366445Ankyrin repeat and KH domain-containing protein 1-like. (2692 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
    0.810
ENSMMDP00005020202
annotation not available
   
    0.716
ENSMMDP00005041087
annotation not available
   
    0.716
ENSMMDP00005025517
annotation not available
   
    0.678
ENSMMDP00005025538
NIPBL cohesin loading factor b.
   
    0.678
ENSMMDP00005055047
NIPBL cohesin loading factor a.
   
    0.678
ZFC3H1
Zinc finger C3H1-type containing.
   
   0.577
pds5a
PDS5 cohesin associated factor A.
   
    0.570
pds5b
PDS5 cohesin associated factor B.
   
    0.570
chd1l
Chromodomain helicase DNA binding protein 1 like.
   
    0.568
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.