STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc47Leucine rich repeat containing 47. (571 aa)    
Predicted Functional Partners:
fdxacb1
Ferredoxin-fold anticodon binding domain containing 1.
  
 0.998
farsa
phenylalanyl-tRNA synthetase subunit alpha.
  
 0.998
fars2
phenylalanyl-tRNA synthetase 2, mitochondrial.
  
 0.995
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.978
yars1
tyrosyl-tRNA synthetase 1.
  
  
 0.964
rps11
Ribosomal protein S11.
  
 
 0.941
rps3
Ribosomal protein S3.
  
 
 0.940
ENSMMDP00005030322
Ribosomal protein S15.
  
 
 0.935
rps13
Ribosomal protein S13.
  
 
 0.933
ENSMMDP00005035861
isoleucyl-tRNA synthetase 1.
  
 
 0.927
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.