STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005054688Protocadherin 1a. (1202 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
  0.604
MARC2
Mitochondrial amidoxime-reducing component 1-like.
    
  0.585
ENSMMDP00005001079
annotation not available
    
  0.536
LOC115363279
Junction plakoglobin-like.
    
  0.536
ENSMMDP00005012038
Amyloid beta (A4) precursor-like protein 2.
    
  0.523
ctnnb1
Catenin beta 1.
    
 0.511
lhfpl2
LHFPL tetraspan subfamily member 2.
    
  0.508
LOC115364961
LHFPL tetraspan subfamily member 2a protein-like.
    
  0.508
UCKL1
Uridine-cytidine kinase 1 like 1.
    
  0.488
LOC115367653
Catenin beta-1-like.
    
  0.488
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.