STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115371940Interferon regulatory factor 1-like. (305 aa)    
Predicted Functional Partners:
MDM2
MDM2 proto-oncogene.
    
 0.898
mdm4
MDM4 regulator of p53.
    
 0.839
LOC115356387
Interferon regulatory factor 2-like.
  
  
 
0.829
ENSMMDP00005030821
Interferon regulatory factor 2.
  
0.803
suox
Sulfite oxidase.
     
 0.779
ENSMMDP00005004122
E1A binding protein p300 b.
    
 0.758
LOC115377697
Histone acetyltransferase p300-like.
    
 0.758
ENSMMDP00005020053
Histone deacetylase 1.
    
 0.756
hdac8
Histone deacetylase 8.
    
 0.756
HDAC2
Histone deacetylase 2.
    
 0.756
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.