Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rbsA_1 | rbsB_1 | RB151_000420 | RB151_000440 | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | D-ribose-binding periplasmic protein precursor. | 0.997 |
| rbsA_1 | rbsC_1 | RB151_000420 | RB151_000430 | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
| rbsA_1 | rbsD | RB151_000420 | RB151_000410 | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.968 |
| rbsA_1 | rbsK_1 | RB151_000420 | RB151_000450 | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.669 |
| rbsA_1 | rbsR_1 | RB151_000420 | RB151_000460 | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | Ribose operon repressor. | 0.557 |
| rbsB_1 | rbsA_1 | RB151_000440 | RB151_000420 | D-ribose-binding periplasmic protein precursor. | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.997 |
| rbsB_1 | rbsC_1 | RB151_000440 | RB151_000430 | D-ribose-binding periplasmic protein precursor. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
| rbsB_1 | rbsD | RB151_000440 | RB151_000410 | D-ribose-binding periplasmic protein precursor. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.980 |
| rbsB_1 | rbsK_1 | RB151_000440 | RB151_000450 | D-ribose-binding periplasmic protein precursor. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.808 |
| rbsB_1 | rbsR_1 | RB151_000440 | RB151_000460 | D-ribose-binding periplasmic protein precursor. | Ribose operon repressor. | 0.636 |
| rbsC_1 | rbsA_1 | RB151_000430 | RB151_000420 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.998 |
| rbsC_1 | rbsB_1 | RB151_000430 | RB151_000440 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | D-ribose-binding periplasmic protein precursor. | 0.998 |
| rbsC_1 | rbsD | RB151_000430 | RB151_000410 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.980 |
| rbsC_1 | rbsK_1 | RB151_000430 | RB151_000450 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.720 |
| rbsC_1 | rbsR_1 | RB151_000430 | RB151_000460 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | Ribose operon repressor. | 0.615 |
| rbsD | rbsA_1 | RB151_000410 | RB151_000420 | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.968 |
| rbsD | rbsB_1 | RB151_000410 | RB151_000440 | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | D-ribose-binding periplasmic protein precursor. | 0.980 |
| rbsD | rbsC_1 | RB151_000410 | RB151_000430 | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.980 |
| rbsD | rbsK_1 | RB151_000410 | RB151_000450 | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.904 |
| rbsD | rbsR_1 | RB151_000410 | RB151_000460 | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | Ribose operon repressor. | 0.609 |
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