Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dacA | dacC | RB151_010540 | RB151_012520 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase DacC precursor; Belongs to the peptidase S11 family. | 0.902 |
| dacA | mrcA | RB151_010540 | RB151_000790 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | Penicillin-binding protein 1A. | 0.913 |
| dacA | spoVD | RB151_010540 | RB151_010570 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | Stage V sporulation protein D; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.591 |
| dacC | dacA | RB151_012520 | RB151_010540 | D-alanyl-D-alanine carboxypeptidase DacC precursor; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | 0.902 |
| dacC | mrcA | RB151_012520 | RB151_000790 | D-alanyl-D-alanine carboxypeptidase DacC precursor; Belongs to the peptidase S11 family. | Penicillin-binding protein 1A. | 0.913 |
| lpoA | mrcA | RB151_037240 | RB151_000790 | Penicillin-binding protein activator LpoA precursor. | Penicillin-binding protein 1A. | 0.788 |
| mrcA | dacA | RB151_000790 | RB151_010540 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | 0.913 |
| mrcA | dacC | RB151_000790 | RB151_012520 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase DacC precursor; Belongs to the peptidase S11 family. | 0.913 |
| mrcA | lpoA | RB151_000790 | RB151_037240 | Penicillin-binding protein 1A. | Penicillin-binding protein activator LpoA precursor. | 0.788 |
| mrcA | mrcB | RB151_000790 | RB151_034080 | Penicillin-binding protein 1A. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.951 |
| mrcA | murC | RB151_000790 | RB151_030440 | Penicillin-binding protein 1A. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.634 |
| mrcA | pbpF | RB151_000790 | RB151_027920 | Penicillin-binding protein 1A. | Penicillin-binding protein 1F. | 0.925 |
| mrcA | pilQ | RB151_000790 | RB151_000750 | Penicillin-binding protein 1A. | Type IV pilus biogenesis and competence protein PilQ precursor; Belongs to the bacterial secretin family. | 0.638 |
| mrcA | secD | RB151_000790 | RB151_007150 | Penicillin-binding protein 1A. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.718 |
| mrcA | spoT | RB151_000790 | RB151_003160 | Penicillin-binding protein 1A. | Bifunctional (p)ppGpp synthase/hydrolase SpoT; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.645 |
| mrcA | spoVD | RB151_000790 | RB151_010570 | Penicillin-binding protein 1A. | Stage V sporulation protein D; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.634 |
| mrcB | mrcA | RB151_034080 | RB151_000790 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.951 |
| mrcB | murC | RB151_034080 | RB151_030440 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.486 |
| mrcB | pbpF | RB151_034080 | RB151_027920 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1F. | 0.911 |
| mrcB | spoVD | RB151_034080 | RB151_010570 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Stage V sporulation protein D; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.907 |
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