STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrB_1Multidrug export protein EmrB. (504 aa)    
Predicted Functional Partners:
emrK_1
Putative multidrug resistance protein EmrK.
 
 
 0.960
emrA_2
Multidrug export protein EmrA.
 
 
 0.719
emrA_1
Multidrug export protein EmrA.
 
 
 0.708
APC10196.1
DoxX.
  
     0.692
mdtN_1
Multidrug resistance protein MdtN.
  
 
 0.692
hsrA_2
Putative transport protein HsrA.
  
     0.677
ttgF
Toluene efflux pump outer membrane protein TtgF precursor.
 
  
 0.662
emrB_2
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
  
     0.645
stp_2
Multidrug resistance protein stp.
  
     0.642
tetR_1
Tetracycline repressor protein class A; From transposon 1721.
 
     0.614
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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