Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prgKLipoprotein PrgK precursor. (249 aa)    
Predicted Functional Partners:
invA
Invasion protein InvA.
 
 
 0.971
mxiD
Outer membrane protein MxiD precursor.
 
 
 0.966
fliQ_2
Flagellar biosynthetic protein FliQ.
 
 
 0.966
fliP_2
Flagellar biosynthetic protein FliP precursor.
 
 
 0.961
APC09922.1
Flagellar biosynthesis protein FliR.
 
 
 0.960
spaS
Surface presentation of antigens protein SpaS.
 
 
 0.954
APC09826.1
Flagellar biosynthesis protein FliR.
 
 
 0.945
APC09910.1
Type III secretion system protein PrgH-EprH (PrgH).
  
 
 0.945
spiA
Type III secretion system outer membrane protein SpiA precursor.
 
 
 0.944
APC09919.1
Type III secretion system protein SpaO.
 
  
 0.939
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.