STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mxiDOuter membrane protein MxiD precursor. (565 aa)    
Predicted Functional Partners:
fliQ_2
Flagellar biosynthetic protein FliQ.
 
 
 0.954
prgK
Lipoprotein PrgK precursor.
 
 
 0.949
APC09919.1
Type III secretion system protein SpaO.
 
  
 0.930
invA
Invasion protein InvA.
 
 
 0.929
APC09922.1
Flagellar biosynthesis protein FliR.
 
 
 0.923
fliP_2
Flagellar biosynthetic protein FliP precursor.
 
 
 0.919
yscJ
Yop proteins translocation lipoprotein J precursor.
 
 
 0.910
APC09910.1
Type III secretion system protein PrgH-EprH (PrgH).
  
 
 0.895
sicA_2
Chaperone protein SicA.
 
    0.887
invF
Invasion protein InvF.
 
  
 0.849
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.