Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccpACatabolite control protein A. (333 aa)    
Predicted Functional Partners:
rihA
Pyrimidine-specific ribonucleoside hydrolase RihA; Belongs to the IUNH family.
       0.694
proP_1
Proline/betaine transporter.
       0.553
yurK
Putative HTH-type transcriptional regulator YurK.
  
     0.456
ureE_2
Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
   
  
 0.440
ureH
Urease accessory protein UreH.
      
 0.437
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
      
 0.430
ureB_2
Urease subunit beta; Belongs to the urease beta subunit family.
      
 0.430
ureF_2
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
      
 0.430
ureG_2
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
      
 0.430
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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