STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaG1,2-epoxyphenylacetyl-CoA isomerase. (264 aa)    
Predicted Functional Partners:
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
 
 
 0.996
paaC
1,2-phenylacetyl-CoA epoxidase, subunit C.
 
 
 0.996
paaH
3-hydroxyadipyl-CoA dehydrogenase.
 0.995
paaF
2,3-dehydroadipyl-CoA hydratase.
 
0.995
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
 
 0.995
paaA
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
 
 0.994
paaJ
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.993
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
 
 
 0.993
paaZ
Bifunctional protein PaaZ.
 
 0.977
paaI
Acyl-coenzyme A thioesterase PaaI.
 
 
 0.940
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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