Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
yecSInner membrane amino-acid ABC transporter permease protein YecS. (250 aa)    
Predicted Functional Partners:
fliY
Cystine-binding periplasmic protein precursor.
 
 0.991
glnM
Putative glutamine ABC transporter permease protein GlnM.
 
 
0.957
glnH
Glutamine-binding periplasmic protein precursor.
 
 0.941
artI
Putative ABC transporter arginine-binding protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.936
glnQ
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.902
artM_2
Arginine transport ATP-binding protein ArtM.
 
 
 0.902
artM_1
Arginine ABC transporter permease protein ArtM.
  
  
  0.849
gltI
Glutamate/aspartate periplasmic-binding protein precursor.
 
 
 0.797
artP
Arginine transport ATP-binding protein ArtP.
  
     0.759
gltK_1
Glutamate/aspartate transport system permease protein GltK.
 
 
 
0.614
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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