STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC10026.1AsmA family protein. (586 aa)    
Predicted Functional Partners:
APC10351.1
Hypothetical protein.
  
     0.764
bhsA
Multiple stress resistance protein BhsA precursor.
  
     0.761
phoQ
Virulence sensor histidine kinase PhoQ.
  
     0.760
APC12219.1
Hypothetical protein.
  
     0.758
uspB
Universal stress protein B.
  
     0.738
qseG
Quorum-sensing regulator protein G precursor.
  
     0.738
tomB
Hha toxicity modulator TomB.
  
     0.737
APC10944.1
Putative bacterial sensory transduction regulator.
  
     0.735
APC13793.1
Opacity-associated protein A LysM-like domain protein.
  
     0.728
holD
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.726
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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