Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dmsA_1Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (806 aa)    
Predicted Functional Partners:
dmsB_1
Anaerobic dimethyl sulfoxide reductase chain B.
 
 
 0.959
dmsC_1
Anaerobic dimethyl sulfoxide reductase chain C.
 
 
 0.944
dmsD_1
Tat proofreading chaperone DmsD.
 
   0.918
dmsB_6
Anaerobic dimethyl sulfoxide reductase chain B.
 
 
 0.845
dmsB_3
Anaerobic dimethyl sulfoxide reductase chain B.
 
 
 0.826
dmsB_5
Anaerobic dimethyl sulfoxide reductase chain B.
 
 
 0.826
dmsD_4
Tat proofreading chaperone DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
 
   0.799
dmsD_2
Tat proofreading chaperone DmsD.
 
   0.789
dmsD_5
Tat proofreading chaperone DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
 
   0.789
dmsC_2
Anaerobic dimethyl sulfoxide reductase chain C.
 
 
 0.771
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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