STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cusSSensor kinase CusS; Member of a two-component regulatory system. (462 aa)    
Predicted Functional Partners:
cusR
Transcriptional regulatory protein CusR.
 
 0.999
cusB
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.856
cusF
Cation efflux system protein CusF precursor.
 
   
 0.845
tctD
Transcriptional regulatory protein tctD.
 
 
 0.826
yycF
Transcriptional regulatory protein YycF.
 
 0.811
cusA
Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.809
phoP
Virulence transcriptional regulatory protein PhoP.
 
 
 0.808
qseB
Transcriptional regulatory protein QseB.
 
 
 0.802
baeR
Transcriptional regulatory protein BaeR.
 
 
 0.793
ompR
Transcriptional regulatory protein OmpR.
 
 
 0.791
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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