Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paiAAcetyltransferase (GNAT) family protein. (169 aa)    
Predicted Functional Partners:
bltD_1
Spermine/spermidine acetyltransferase.
  
 
  0.976
bltD_3
Spermine/spermidine acetyltransferase.
  
  
 
0.925
speG_2
Spermidine N(1)-acetyltransferase.
   
 
  0.901
speF
Ornithine decarboxylase, inducible.
     
  0.900
speB_2
N(1)-aminopropylagmatine ureohydrolase; Belongs to the arginase family.
     
  0.900
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
     
  0.900
tmrB
Tunicamycin resistance protein.
  
     0.488
APC14098.1
Hypothetical protein.
  
     0.454
APC12599.1
Topology modulation protein.
  
     0.438
rdgC
Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.
       0.427
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.